Three-dimensional (3D) cell culture is well documented to regain intrinsic metabolic properties and to better mimic the in vivo situation than two-dimensional (2D) cell culture. Particularly,
proline metabolism is critical for
tumorigenesis since
pyrroline-5-carboxylate (
P5C) reductase (PYCR/P5CR) is highly expressed in various
tumors and its enzymatic activity is essential for in vitro 3D
tumor cell growth and in vivo
tumorigenesis. PYCR converts the P5C intermediate to
proline as a biosynthesis pathway, whereas
proline dehydrogenase (PRODH) breaks down
proline to P5C as a degradation pathway. Intriguingly, expressions of
proline biosynthesis PYCR gene and
proline degradation PRODH gene are up-regulated directly by c-Myc
oncoprotein and p53
tumor suppressor, respectively, suggesting that the proline-P5C metabolic axis is a key checkpoint for
tumor cell growth. Here, we report a metabolic reprogramming of 3D
tumor cell growth by oncogenic Kaposi's sarcoma-associated herpesvirus (KSHV), an etiological agent of
Kaposi's sarcoma and
primary effusion lymphoma. Metabolomic analyses revealed that KSHV
infection increased nonessential
amino acid metabolites, specifically
proline, in 3D culture, not in 2D culture. Strikingly, the KSHV K1
oncoprotein interacted with and activated PYCR
enzyme, increasing intracellular
proline concentration. Consequently, the K1-PYCR interaction promoted
tumor cell growth in 3D spheroid culture and
tumorigenesis in nude mice. In contrast, depletion of PYCR expression markedly abrogated K1-induced
tumor cell growth in 3D culture, not in 2D culture. This study demonstrates that an increase of
proline biosynthesis induced by K1-PYCR interaction is critical for KSHV-mediated transformation in in vitro 3D culture condition and in vivo
tumorigenesis.