While
cyclin-dependent kinase 4/6 (CDK4/6) inhibitors, including
palbociclib, combined with endocrine
therapy (ET), are becoming the standard-of-care for
hormone receptor-positive/human
epidermal growth factor receptor 2‒negative metastatic
breast cancer, further mechanistic insights are needed to maximize benefit from the treatment regimen. Herein, we conducted a systematic comparative analysis of gene expression/progression-free survival relationship from two phase 3 trials (PALOMA-2 [first-line] and PALOMA-3 [≥second-line]). In the ET-only arm, there was no inter-
therapy line correlation. However, adding
palbociclib resulted in concordant
biomarkers independent of initial ET responsiveness, with shared sensitivity genes enriched in
estrogen response and resistance genes over-represented by
mTORC1 signaling and G2/M checkpoint.
Biomarker patterns from the combination arm resembled patterns observed in ET in advanced treatment-naive patients, especially patients likely to be endocrine-responsive. Our findings suggest
palbociclib may recondition endocrine-resistant
tumors to ET, and may guide optimal therapeutic sequencing by partnering CDK4/6 inhibitors with different ETs. Pfizer (NCT01740427; NCT01942135).