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Secondary resistance to immunotherapy associated with β-catenin pathway activation or PTEN loss in metastatic melanoma.

AbstractBACKGROUND:
While cancer immunotherapies including checkpoint blockade antibodies, adoptive T cell therapy, and even some vaccines have given rise to major clinical responses with durability in many cases, a subset of patients who initially respond subsequently develop secondary resistance to therapy. Tumor-intrinsic mechanisms of acquired immunotherapy resistance are incompletely understood.
METHODS:
Baseline and treatment-resistant tumors underwent molecular analysis via transcriptional profiling or genomic sequencing for oncogenic alterations and histologic analysis for T cell infiltration to investigate mechanisms contributing to T cell exclusion and acquired resistance to immunotherapy.
RESULTS:
We describe two patients with metastatic melanoma who initially showed a durable partial response to either a melanoma-peptide/interleukin-12 vaccine or combined anti-CTLA-4 + anti-PD-1 therapy, but subsequently developed new treatment-resistant metastases. In the first case, the recurrent tumor showed new robust tumor expression of β-catenin, whereas in the second case genomic sequencing revealed acquired PTEN loss. Both cases were associated with loss of T cell infiltration, and both pathways have been mechanistically linked to immune resistance preclinically.
CONCLUSION:
Our results suggest that secondary resistance to immunotherapies can arise upon selection for new oncogenic variants that mediate T cell exclusion. To identify the spectrum of underlying mechanisms of therapeutic resistance, similar evaluation for the emergence of tumor-intrinsic alterations in resistant lesions should be done prospectively at the time of relapse in a range of additional patients developing secondary resistance.
AuthorsJonathan A Trujillo, Jason J Luke, Yuanyuan Zha, Jeremy P Segal, Lauren L Ritterhouse, Stefani Spranger, Karen Matijevich, Thomas F Gajewski
JournalJournal for immunotherapy of cancer (J Immunother Cancer) Vol. 7 Issue 1 Pg. 295 (11 08 2019) ISSN: 2051-1426 [Electronic] England
PMID31703593 (Publication Type: Case Reports, Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't)
Chemical References
  • Antineoplastic Agents, Immunological
  • CTLA-4 Antigen
  • CTLA4 protein, human
  • CTNNB1 protein, human
  • Cancer Vaccines
  • Ipilimumab
  • PDCD1 protein, human
  • Programmed Cell Death 1 Receptor
  • beta Catenin
  • Interleukin-12
  • Nivolumab
  • PTEN Phosphohydrolase
  • PTEN protein, human
Topics
  • Adult
  • Antineoplastic Agents, Immunological (therapeutic use)
  • CTLA-4 Antigen (antagonists & inhibitors)
  • Cancer Vaccines (therapeutic use)
  • Drug Resistance, Neoplasm
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Immunotherapy
  • Interleukin-12 (immunology)
  • Ipilimumab (therapeutic use)
  • Male
  • Melanoma (genetics, metabolism, pathology, therapy)
  • Middle Aged
  • Nivolumab (therapeutic use)
  • PTEN Phosphohydrolase (genetics, metabolism)
  • Programmed Cell Death 1 Receptor (antagonists & inhibitors)
  • Signal Transduction
  • Transcriptome
  • Young Adult
  • beta Catenin (genetics)

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