Abstract | OBJECTIVES: Deletion/insertion (Del/Ins) throughout hepatitis B virus (HBV) genome has not been well studied for HBeA-positive chronic hepatitis B (CHB) patients. This study aimed to characterize the HBV Del/Ins mutations in full-length genome quasispecies sequences in such patients at antiviral baseline and to reveal their potential impacts on HBV serological markers and responses to nucleos(t)ide analogue (NUC) treatment. MATERIALS AND METHODS: A total of 30 HBeAg-positive CHB patients with genotype C infection receiving a 104-week lamivudine (LMV) and adefovir dipivoxil (ADV) combination therapy were enrolled. HBV whole genome sequences in serum samples at baseline were clone sequenced and analyzed using bioinformatics tools. RESULTS: Among 306 unspliced clone sequences, 61.8% (189/306) had Del/Ins mutations, 38.2% (117/306) were full-length genomes without any Del/Ins. Due to different combinations of 125 deletion types and 45 insertion types, we identified 55 Del/Ins-harboring HBV genome patterns, which affected a single or several functional genomic regions. Importantly, the proportion of Del/Ins-harboring clones was found to be significantly negatively correlated with HBsAg (r = -0.3985, P = 0.0292) and HBeAg (r = -0.3878, P = 0.0342) at baseline. Higher percentage of Del/Ins-harboring clones at baseline was found to predict a shorter interval to HBeAg loss and seroconversion. CONCLUSION: Del/Ins mutations within HBV whole genome were prevalent in HBeAg-positive CHB patients prior to antiviral treatment. A higher detection rate of these mutations at baseline might correlate with a better response to LMV and ADV combination therapy.
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Authors | Ran Hao, Kuanhui Xiang, Yaqin Peng, Jinlin Hou, Jian Sun, Yao Li, Mingze Su, Ling Yan, Hui Zhuang, Tong Li |
Journal | Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
(Infect Genet Evol)
Vol. 33
Pg. 261-8
(Jul 2015)
ISSN: 1567-7257 [Electronic] Netherlands |
PMID | 25976382
(Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
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Copyright | Copyright © 2015 Elsevier B.V. All rights reserved. |
Chemical References |
- Antiviral Agents
- Biomarkers
- Hepatitis B Surface Antigens
- Hepatitis B e Antigens
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Topics |
- Adolescent
- Adult
- Antiviral Agents
(therapeutic use)
- Biomarkers
- Female
- Genome, Viral
- Hepatitis B Surface Antigens
(blood)
- Hepatitis B e Antigens
(blood)
- Hepatitis B virus
(genetics)
- Hepatitis B, Chronic
(blood, drug therapy, virology)
- Humans
- INDEL Mutation
- Male
- Sequence Analysis, DNA
- Seroconversion
- Treatment Outcome
- Viral Load
- Young Adult
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