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Structural and kinetic analysis of protein-aggregate strains in vivo using binary epitope mapping.

Abstract
Despite considerable progress in uncovering the molecular details of protein aggregation in vitro, the cause and mechanism of protein-aggregation disease remain poorly understood. One reason is that the amount of pathological aggregates in neural tissue is exceedingly low, precluding examination by conventional approaches. We present here a method for determination of the structure and quantity of aggregates in small tissue samples, circumventing the above problem. The method is based on binary epitope mapping using anti-peptide antibodies. We assessed the usefulness and versatility of the method in mice modeling the neurodegenerative disease amyotrophic lateral sclerosis, which accumulate intracellular aggregates of superoxide dismutase-1. Two strains of aggregates were identified with different structural architectures, molecular properties, and growth kinetics. Both were different from superoxide dismutase-1 aggregates generated in vitro under a variety of conditions. The strains, which seem kinetically under fragmentation control, are associated with different disease progressions, complying with and adding detail to the growing evidence that seeding, infectivity, and strain dependence are unifying principles of neurodegenerative disease.
AuthorsJohan Bergh, Per Zetterström, Peter M Andersen, Thomas Brännström, Karin S Graffmo, P Andreas Jonsson, Lisa Lang, Jens Danielsson, Mikael Oliveberg, Stefan L Marklund
JournalProceedings of the National Academy of Sciences of the United States of America (Proc Natl Acad Sci U S A) Vol. 112 Issue 14 Pg. 4489-94 (Apr 07 2015) ISSN: 1091-6490 [Electronic] United States
PMID25802384 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
Chemical References
  • Epitopes
  • Proteins
  • SOD1 protein, human
  • Sod1 protein, mouse
  • Superoxide Dismutase
  • Superoxide Dismutase-1
Topics
  • Amino Acid Sequence
  • Amyotrophic Lateral Sclerosis (genetics)
  • Animals
  • Brain (metabolism)
  • Epitope Mapping (methods)
  • Epitopes (chemistry)
  • Humans
  • Mice
  • Mice, Transgenic
  • Molecular Sequence Data
  • Neurodegenerative Diseases (metabolism)
  • Protein Conformation
  • Protein Folding
  • Protein Multimerization
  • Proteins (chemistry)
  • Spinal Cord (metabolism)
  • Superoxide Dismutase (chemistry, genetics)
  • Superoxide Dismutase-1

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