Transcription factor NFκB is a key regulator of genes involved in immune and inflammatory responses, as well as genes regulating cell proliferation and survival. In addition to many inflammatory disorders, NFκB is constitutively activated in a variety of human
cancers and
leukemia. Thus, inhibition of NFκB
DNA binding activity represents an important therapeutic approach for disorders characterized by high levels of constitutive NFκB activity. We have previously shown that NFκB
DNA binding activity is suppressed by the nuclear translocation and accumulation of IκBα, which is induced by inhibition of the
26S proteasome. In this chapter, we describe a protocol that uses small inhibitory
RNA (si RNA) interference followed by electrophoretic mobility shift assay (EMSA) to analyze the regulation of NFκB
DNA binding by nuclear IκBα induced by the
proteasome inhibitor MG132. Using this protocol, we show that in human
leukemia Hut-78 cells that exhibit high levels of NFκB
DNA binding activity,
MG132 induces nuclear translocation and accumulation of IκBα, which then specifically inhibits NFκB
DNA binding. This protocol uses human
leukemia Hut-78 cells; however, it can be easily adapted for other cells exhibiting high levels of constitutive NFκB
DNA binding.