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Coexpression of Argonaute-2 enhances RNA interference toward perfect match binding sites.

Abstract
RNAi is widely applied to inhibit expression of specific genes, but it is limited by variable efficiency and specificity of empirically designed siRNA or shRNA constructs. This complicates studies targeting individual genes and significantly impairs large-scale screens using genome-wide knockdown libraries. Here, we show that ectopic expression of the RISC slicer Argonaute-2 (Ago2, eIF2C2) dramatically enhances RNAi specifically for mRNA targets with perfectly matched binding sites. This effect depends on its endonuclease activity and is uncoupled from its regulation of microRNA expression. To model the application of Ago2 coexpression with shRNA knockdown, we targeted the EGF receptor (EGFR) in lung cancer cells exhibiting oncogene addiction to EGFR. Whereas multiple empirically designed shRNA constructs exhibited highly divergent efficiencies in mediating EGFR knockdown and cell killing, coexpression of Ago2 resulted in uniform and highly specific target gene suppression and apoptosis in EGFR-dependent cells. Codelivery of Ago2 with shRNA constructs or siRNA duplexes thus provides a strategy to enhance the efficacy and the specificity of RNAi in experimental and potentially therapeutic settings.
AuthorsSven Diederichs, Stephanie Jung, S Michael Rothenberg, Gromoslaw A Smolen, Barbara G Mlody, Daniel A Haber
JournalProceedings of the National Academy of Sciences of the United States of America (Proc Natl Acad Sci U S A) Vol. 105 Issue 27 Pg. 9284-9 (Jul 08 2008) ISSN: 1091-6490 [Electronic] United States
PMID18591665 (Publication Type: Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't)
Chemical References
  • AGO2 protein, human
  • Argonaute Proteins
  • Eukaryotic Initiation Factor-2
  • RNA, Small Interfering
  • ErbB Receptors
Topics
  • Argonaute Proteins
  • Binding Sites
  • Cell Death
  • Cell Line
  • ErbB Receptors (metabolism)
  • Eukaryotic Initiation Factor-2 (metabolism)
  • Humans
  • RNA Interference
  • RNA, Small Interfering (metabolism)

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