Network Pharmacology Prediction: The Possible Mechanisms of Cinobufotalin against Osteosarcoma.

Abstract

OBJECTIVE:

To explore the active compounds and targets of cinobufotalin (huachansu) compared with the osteosarcoma genes to obtain the potential therapeutic targets and pharmacological mechanisms of action of cinobufotalin on osteosarcoma through network pharmacology.

METHODS:

The composition of cinobufotalin was searched by literature retrieval, and the target was selected from the CTD and TCMSP databases. The osteosarcoma genes, found from the GeneCards, OMIM, and other databases, were compared with the cinobufotalin targets to obtain potential therapeutic targets. The protein-protein interaction (PPI) network of potential therapeutic targets, constructed through the STRING database, was inputted into Cytoscape software to calculate the hub genes, using the NetworkAnalyzer. The hub genes were inputted into the Kaplan-Meier Plotter online database for exploring the survival curve. Functional enrichment analysis was identified using the DAVID database.

RESULTS:

28 main active compounds of cinobufotalin were explored, including bufalin, adenosine, oleic acid, and cinobufagin. 128 potential therapeutic targets on osteosarcoma are confirmed among 184 therapeutic targets form cinobufotalin. The hub genes included TP53, ACTB, AKT1, MYC, CASP3, JUN, TNF, VEGFA, HSP90AA1, and STAT3. Among the hub genes, TP53, ACTB, MYC, TNF, VEGFA, and STAT3 affect the patient survival prognosis of sarcoma. Through function enrichment analysis, it is found that the main mechanisms of cinobufotalin on osteosarcoma include promoting sarcoma apoptosis, regulating the cell cycle, and inhibiting proliferation and differentiation.

CONCLUSION:

The possible mechanisms of cinobufotalin against osteosarcoma are preliminarily predicted through network pharmacology, and further experiments are needed to prove these predictions.

• Authors: Riyu Chen, Zeyi Guan, Xianxing Zhong, Wenzheng Zhang, Ya Zhang
• Journal: Computational and mathematical methods in medicine (Comput Math Methods Med) Vol. 2022 Pg. 3197402 ( 2022) ISSN: 1748-6718 [Electronic] United States
• PMID: 35069780 (Publication Type: Journal Article, Retracted Publication)
• Copyright: Copyright © 2022 Riyu Chen et al.

Chemical References

• Antineoplastic Agents
• Biomarkers, Tumor
• Bufanolides
• cinobufotalin

Topics

• Antineoplastic Agents (chemistry, pharmacology)
• Biomarkers, Tumor (genetics)
• Bone Neoplasms (drug therapy, genetics)
• Bufanolides (chemistry, pharmacology)
• Computational Biology
• Databases, Chemical
• Databases, Pharmaceutical
• Gene Regulatory Networks (drug effects)
• Humans
• Medicine, Chinese Traditional
• Network Pharmacology
• Osteosarcoma (drug therapy, genetics)
• Protein Interaction Maps (drug effects, genetics)