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Exome sequencing and SNP analysis detect novel compound heterozygosity in fatty acid hydroxylase-associated neurodegeneration.

Abstract
Fatty acid hydroxylase-associated neurodegeneration due to fatty acid 2-hydroxylase deficiency presents with a wide range of phenotypes including spastic paraplegia, leukodystrophy, and/or brain iron deposition. All previously described families with this disorder were consanguineous, with homozygous mutations in the probands. We describe a 10-year-old male, from a non-consanguineous family, with progressive spastic paraplegia, dystonia, ataxia, and cognitive decline associated with a sural axonal neuropathy. The use of high-throughput sequencing techniques combined with SNP array analyses revealed a novel paternally derived missense mutation and an overlapping novel maternally derived ~28-kb genomic deletion in FA2H. This patient provides further insight into the consistent features of this disorder and expands our understanding of its phenotypic presentation. The presence of a sural nerve axonal neuropathy had not been previously associated with this disorder and so may extend the phenotype.
AuthorsTyler Mark Pierson, Dimitre R Simeonov, Murat Sincan, David A Adams, Thomas Markello, Gretchen Golas, Karin Fuentes-Fajardo, Nancy F Hansen, Praveen F Cherukuri, Pedro Cruz, James C Mullikin, Craig Blackstone, Cynthia Tifft, Cornelius F Boerkoel, William A Gahl, NISC Comparative Sequencing Program
JournalEuropean journal of human genetics : EJHG (Eur J Hum Genet) Vol. 20 Issue 4 Pg. 476-9 (Apr 2012) ISSN: 1476-5438 [Electronic] England
PMID22146942 (Publication Type: Case Reports, Journal Article, Research Support, N.I.H., Extramural, Research Support, N.I.H., Intramural)
Chemical References
  • Mixed Function Oxygenases
  • fatty acid alpha-hydroxylase
Topics
  • Amino Acid Sequence
  • Base Sequence
  • Child
  • DNA Copy Number Variations
  • Exome (genetics)
  • Heterozygote
  • Humans
  • Male
  • Mixed Function Oxygenases (genetics)
  • Molecular Sequence Data
  • Neurodegenerative Diseases (enzymology, genetics)
  • Pedigree
  • Polymorphism, Single Nucleotide

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